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Craig A. Cooney, Ph.D.

Assistant Professor

Ph.D, University of California, Davis

 

 

 

Mammalian Lifespan Extension and Advanced Cancer Chemotherapies

Extension of lifespan.  We study the role of epigenetics and the melanocortin 4 receptor (MC4R) on the health and lifespan of mammals.  Epigenetics and the action of the MC4R can be changed by genes, drugs and nutrition.  Our long-term goal is to greatly increase the healthy lifespan of mice and people.

Epigenetic markers of biological age.  We study epigenetic markers that correlate with biological age.  These markers may give us accurate predictors of how long mice will live. 

Maternal effects.  We were the first to change offspring epigenetics through the maternal diet in mammals.  We use these and other methods to study other maternal effects on offspring epigenetics.

Cancer epigenetics.  We are pursuing novel, low-toxicity approaches to change cancer cell metabolism from simple glycolysis (Warburg effect) to instead cause cancer cells to produce acetyl-CoA from glucose and make it available for histone acetylation and activation of tumor suppressor genes.  Normal cells are expected to be largely unaffected by the combination of low dose, low toxicity drugs used to achieve these ends.  Our long term focus is to develop treatments that eradicate at least some cancers yet have few or no side effects for patients.


Selected Publications

Wolff GL, Kodell RL, Moore SR, Cooney CA (1998) Maternal Epigenetics and Methyl Supplements Affect Agouti Gene Expression in Avy/a Mice. FASEB Journal, 12, 949-957

Cooney CA, Wise, CW, Poirier LA, Ali SF (1998) Methamphetamine Treatment Affects Blood and Liver S-Adenosylmethionine (SAM) in Mice: Correlation with Dopamine Depletion in the Striatum. Annals of the New York Academy of Sciences 844, 191-200

Southern F, Cruz N, Fink LN, Cooney CA, Barone GW, Eidt JF, Moursi MM (1998) Hyperhomocysteinemia Increases Intimal Hyperplasia in a Rat Carotid Endarterectomy Model. Journal of Vascular Surgery, 28, 909-918

Cooney CA (2001) Dietary Selenium and Arsenic Affect DNA Methylation. Journal of Nutrition 131, 1871

Cooney CA, Dave AA, Wolff GL (2002) Maternal Methyl Supplements in Mice Affect Epigenetic Variation and DNA Methylation of Offspring. Journal of Nutrition 132, 2393S-2400S

Kaput J, Klein KG, Reyes EJ, Kibbe WA, Cooney CA, Jovanovic B, Visek WJ, Wolff GL (2004) Identification of Genes Contributing to the Obese Yellow Avy Phenotype: Caloric Restriction, Genotype, Diet x Genotype Interactions. Physiological Genomics 18, 316-324.

Kurmasheva RT, Peterson CA, Parham DM, Chen B, McDonald RE, Cooney CA (2005) Upstream CpG Island Methylation of the PAX3 Gene in Human Rhabdomyosarcomas. Pediatric Blood and Cancer 44, 328-337.

Safar MA, Spencer H, Su X, Coffey M, Cooney CA, Ratnasinghe LD, Hutchins LF, Fan C-Y (2005) Methylation Profiling of Archived Non-Small Cell Lung Cancer: A Promising Prognostic System. Clinical Cancer Research 11, 4400-4405.

Cooney CA (2006) Maternal Nutrition: Nutrients and Control of Expression. in Nutrigenomics: Concepts and Technologies. James Kaput and Raymond L. Rodriguez, editors. pp219-254 John Wiley and Sons, Hoboken, New Jersey

C     Cooney CA (2006) Germ Cells Carry the Epigenetic Benefits of Grandmother's Diet. Proc Natl Acad Sci USA, 103, 17071-17072

Cooney CA (2007) Epigenetics - DNA-based Mirror of Our Environment. Disease Markers 23, 121-137

Xie C-H, Naito A, Mizumachi T, Evans TT, Douglas MG, Cooney CA, Fan C-Y, Higuchi M (2007) Mitochondrial Regulation of Cancer Associated Nuclear DNA Methylation. Biochem Biophys Res Commun 364, 656-61

Cooney CA (2008) Cancer and Aging: The Epigenetic Connection. in Cancer Epigenetics.  Trygve Tollefsbol, editor CRC Press, Boca Raton FL pp 303-316.

Leakey TI, Zielinski J, Siegfried RN, Siegel ER, Fan C-Y, Cooney CA (2008) A simple algorithm for quantifying DNA methylation levels on multiple independent CpG sites in bisulfite genomic sequencing electropherograms.  Nucleic Acids Research 36, e64

Cooney CA (2009) Nutrients, Epigenetics, and Embryonic Development. in Nutrients and Epigenetics.  Sang Woon Choi and Simonetta Friso, editors CRC Press, Boca Raton FL pp 155-174.

Ounpraseuth S, Rafferty TM, McDonald-Phillips RE, Gammill WM, Siegel ER, Wheeler KL, Nilsson EA, Cooney CA (2009) A Method to Quantify Mouse Coat-Color Proportions. PLoS ONE 4, e5414

PubMed link to additional publications

E-mail: CooneyCraiga@uams.edu
Office (501) 960-0900 Biomedical Research Center B421D
Lab: (501) 603-1004 Biomedical Research Center B416
FAX: (501) 686-8169
 
 
 

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Department of Biochemistry and Molecular Biology
University of Arkansas for Medical Sciences
4301 W. Markham St., Slot 516
Little Rock, AR 72205